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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913302.1_cds_XP_016463353.1_56482
CDS Infomation

[gene=LOC107786400] [db_xref=GeneID:107786400] [protein=peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like] [protein_id=XP_016463353.1] [location=join(14562..14655,14759..14830,17040..17102,17194..17250,17388..17455,17537..17618,17719..17774,18199..18501,18720..18806,19503..19677,19845..19966,20155..20318,20849..21103,21373..21494,21572..21693,21812..21960,22387..22525,23235..23282)] [gbkey=CDS]
Sequence

ATGGCGGAAGTGAAAGTGACGATGGAAGTTGGAACTGACGGTGTTGCCGTTATCACGATT
TCTAATCCTCCAGTTAATGCTCTTGCAATTCAAATTTTTGCTGGATTAAAGGAGAAATGG
AACGAAGCAGCTAAGAGAAATGATGTCAAAGCTATTGTTTTGACTGGACATGGTGGGAGG
TTTTCTGGTGGTTTTGACATCAATGTCTTCCAAAAGGTTCATACGACAGGAGATATTTCT
TTACTGCCTGGTGTTTCTATTGATCTCGTGGTGAACACTATGGAAGATGGAAAGAAGCCT
GCAGTTGCTGCCGTGGAAGGACTTTGTCTTGGTGGTGGCTTGGAATTGGCATTGGGATGC
CATGCACGCATTGCTGCGCCAAGAACACAACTTGGGTTGCCAGAGCTTAGCCTTGGAGTT
CTTCCTGGCTCTGGAGGTACACAACGTCTTCCAAGGCTTATAGGGTTGTCAAAGGCCATT
GAGATGATGATGACGTCCAAACCAATAATGTCAGAAGAAGGGAAGAAGCTAGGTCTCATT
GATGCAATTGTCCCTTCAACAGAGTTGTTGAAAGTAGCTAGACAGTGGGCACTTGACATT
GCAGAACGGCGCAAACCTTGGATGCGTTCCCTTCACAGGACCGACAAAATTGGTTCCCTT
TCAGAAGCACGGGAGGTACTGAAGTCGGCTAGGCAACAAGTGAAGCAAACAGCTCGGAAT
ATGCCTCAGCACTTGGCATGCCTTGATGTAATTGAAGAAGGCATAGTCCATGGTGGATAT
AATGGGGTTCTCAAGGAAGCTCAAGTATTTGAGGACCTAGTATTATCAGATACGTCAAGA
GGTCTTGTTCATGTATTTTTTGCCCAACGGGCTACATCAAAGGTACCTAATGTATCTGAT
ATTGGTCTGAAACCAAGGCCAATGAAGAAAGTTGCCATAATAGGTGGAGGTTTAATGGGT
TCAGGCATAGCTACCGCTCTAGTTCTGAGCAACATATTTGTTATTCTCAAGGAAATTAAT
CCCGAGTATCTTCAAAAGGGGATAAAAGCAGTTGAAGCAAACATACGAGGATTGGTAGCG
AGAAAGAAGTTGCAGCAGGACAAAGCAAACAAAGCTCTCTCAATTGTTAAAGGTGTACTG
GATTACTCAGAATTTAAGGATGTGGATATGGTCATAGAGGCTGTCATTGAAAATGTTCCG
CTAAAACAACAAATCTTCAGTGATATTGAGAAGGTCTGTCCTCCTCACTGTATTTTGGCA
ACCAATACATCTACCATTGACCTCAACCTGATTGGAGAAAAGACGAGATCTCAAGATCGG
GTTATAGGGGCACACTTTTTTAGTCCTGCTCATGTGATGCCTCTGCTGGAGATAGTACGG
ACCGAGAAGACATCTGCACAGGCAATTCTCGACCTCATGGCTGTTGGCAAATCAATAAAG
AAAGTACCTGTTGTAGTGGGAAACTGTACTGGTTTTGCTGTGAATAGGACATTCTTTCCA
TATTCCCATAGTGCACATACTCTCGCCAATCTTGGAGTGGATGTCTACAGGATTGATGCG
CAAATCACTAGCTTTGGTCTCCCTATTGGTCCATTCCAGCTTCAGGATTTGGCTGGATAT
GGAGTAGCTGTTGCTACAGGGAAAGAGTTTACTTCGGCTTTTCCTGATAGAACATTTAAG
TCTCCAATGCTTGACCTTCTAATAAAAAGTGGGCGAAATGGTAAAAACAATGGAAAAGGA
TACTACATTTACAAGAAGGGAGAGAAGCCAAAACCTGATCCTTCAGTGCTTCCAATTATT
GAGGAGTCCAGAAGGCTCACTAATATTATGCCTGGAGGAAAGCCAATATCTGTTACCGAT
CAAGAAATTGTTGAGATGATACTCTTTCCCGTTGTGAACGAGGCATGTCGTGTTTTGGAA
GACGGGGTTGTAGTCCGGGCATCAGACCTTGATGTCGCTTCTGTACTTGGAATGAGTTTC
CCATCTTATAGAGGTGGCATTGTTTTCTGGGCAGATACAGTTGGGGCTGATCATATATAT
AAAAGCCTCAAGAAGTGGTCAGAACTATATGGTAATTTCTTCAAGCCATCAAGGTTCTTG
GAAGAGAGAGCAGCAAACGGCGTTCCCTTGAGCGCTCCTGCTTCTACCCCTTCTTCATCT
TCAAGGTCACGCATGTGA

Peptide Sequence

PEP ID

XP_016463353.1
PEP Infomation

PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like [Nicotiana tabacum]
Sequence

MAEVKVTMEVGTDGVAVITISNPPVNALAIQIFAGLKEKWNEAAKRNDVKAIVLTGHGGR
FSGGFDINVFQKVHTTGDISLLPGVSIDLVVNTMEDGKKPAVAAVEGLCLGGGLELALGC
HARIAAPRTQLGLPELSLGVLPGSGGTQRLPRLIGLSKAIEMMMTSKPIMSEEGKKLGLI
DAIVPSTELLKVARQWALDIAERRKPWMRSLHRTDKIGSLSEAREVLKSARQQVKQTARN
MPQHLACLDVIEEGIVHGGYNGVLKEAQVFEDLVLSDTSRGLVHVFFAQRATSKVPNVSD
IGLKPRPMKKVAIIGGGLMGSGIATALVLSNIFVILKEINPEYLQKGIKAVEANIRGLVA
RKKLQQDKANKALSIVKGVLDYSEFKDVDMVIEAVIENVPLKQQIFSDIEKVCPPHCILA
TNTSTIDLNLIGEKTRSQDRVIGAHFFSPAHVMPLLEIVRTEKTSAQAILDLMAVGKSIK
KVPVVVGNCTGFAVNRTFFPYSHSAHTLANLGVDVYRIDAQITSFGLPIGPFQLQDLAGY
GVAVATGKEFTSAFPDRTFKSPMLDLLIKSGRNGKNNGKGYYIYKKGEKPKPDPSVLPII
EESRRLTNIMPGGKPISVTDQEIVEMILFPVVNEACRVLEDGVVVRASDLDVASVLGMSF
PSYRGGIVFWADTVGADHIYKSLKKWSELYGNFFKPSRFLEERAANGVPLSAPASTPSSS
SRSRM

Transcript Sequence

Gene sequence data has not been registered.